Gene: Cre05.g239250

Overview

Common name:
Defline:(1 of 1) IPR003613//IPR003888//IPR003889//IPR013083 - U box domain // FY-rich, N-terminal // FY-rich, C-terminal // Zinc finger, RING/FYVE/PHD-type
Description:
Synonyms:g5519.t1,Cre05.g239250.t1.1
Chromosome:chromosome 5

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.034004_1 CLIP2.034004 intron 80 6.1
CLIP2.034004_2 CLIP2.034004 intron 80 6.1
CLIP2.057623_1 CLIP2.057623 intron 63 6.1
CLIP2.062263_1 CLIP2.062263 3'UTR 80 6.1
CLIP2.062263_2 CLIP2.062263 3'UTR 80 6.1
CLIP2.066583_1 CLIP2.066583 intron 63 6.1
CLIP2.077052_1 CLIP2.077052 intron 40 6.1
LMJ.RY0402.053982_1 LMJ.RY0402.053982 3'UTR 73 5.5
LMJ.RY0402.086780_1 LMJ.RY0402.086780 3'UTR 73 5.5
LMJ.RY0402.193927_1 LMJ.RY0402.193927 3'UTR 73 5.5
LMJ.RY0402.253068_1 LMJ.RY0402.253068 3'UTR 73 5.5
LMJ.SG0182.019989_1 LMJ.SG0182.019989 intron 75 5.3

Gene Annotations

PFAM:PF05964, PF05965
PANTHER: PTHR22715
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::GO:0004842, GO:0005634, GO:0016567
Best arabidopsis TAIR name:AT1G08620.1
Best arabidopsis TAIR symbol:PKDM7D
Best arabidopsis TAIR defline:Transcription factor jumonji (jmj) family protein / zinc finger
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.