Insertion junction: LMJ.RY0402.253068_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.253068
Chromosome:chromosome 5
Location:3137953
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g239250 (1 of 1) IPR003613//IPR003888//IPR003889//IPR013083 - U box domain // FY-rich, N-terminal // FY-rich, C-terminal // Zinc finger, RING/FYVE/PHD-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTAAACTCGTAGGGTACCAAGCCCCCG
Internal bar code:TCGATCTGCCACCGTCAACTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:526
LEAP-Seq percent confirming:99.1416
LEAP-Seq n confirming:462
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGACCTTCTCGCTTCACA
Suggested primer 2:CCTTCACCAAGAAGTCGCTC