Insertion junction: CLIP2.066583_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066583
Chromosome:chromosome 5
Location:2519245
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre05.g239250 (1 of 1) IPR003613//IPR003888//IPR003889//IPR013083 - U box domain // FY-rich, N-terminal // FY-rich, C-terminal // Zinc finger, RING/FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGGGTTGCATTCATGGTTAGCTAAGGAGGAGCGGGTGAGGAGTGGGGT
Internal bar code:CAGTTGAGTATGTCGCACTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2104
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAAGTTCAGGGTCGGTCG
Suggested primer 2:CAAGCAAGAGCAGAGGGTGA