Insertion junction: LMJ.RY0402.086780_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.086780
Chromosome:chromosome 5
Location:3138232
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g239250 (1 of 1) IPR003613//IPR003888//IPR003889//IPR013083 - U box domain // FY-rich, N-terminal // FY-rich, C-terminal // Zinc finger, RING/FYVE/PHD-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAACGGAACTATGCCAATGCTCCCAAGA
Internal bar code:TTTCCGCAAGTATTATTTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:193
LEAP-Seq percent confirming:93.9216
LEAP-Seq n confirming:479
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCACCAAGAAGTCGCTC
Suggested primer 2:AAGGACCTTCTCGCTTCACA