Insertion junction: CLIP2.062263_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062263
Chromosome:chromosome 5
Location:2520110
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g239250 (1 of 1) IPR003613//IPR003888//IPR003889//IPR013083 - U box domain // FY-rich, N-terminal // FY-rich, C-terminal // Zinc finger, RING/FYVE/PHD-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACTCATAAATACCACCTCCGGGTTGCCCGCCTGCCCGACCGGCCGTC
Internal bar code:GCCTACAGCGATCTCGATGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2369
LEAP-Seq percent confirming:85.1852
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCTGGACCCCATCACAC
Suggested primer 2:CCAAAAGTGACCGCAACCTG