Insertion junction: CLIP2.034040_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034040
Chromosome:chromosome 6
Location:3803878
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278174 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGGAGAGGAGGCGATGTCAATTGCCTCAGCACTGCTGCCTCATCCCTT
Internal bar code:TGATTTCACCGGGGGTGTAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:224
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGACTGCAGGATGGACCCTA
Suggested primer 2:GAGTAAACCGACCCTGGTGG