| Common name: | |
| Defline: | (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase |
| Description: | |
| Synonyms: | g6317.t1,Cre13.g597000.t1.1 |
| Chromosome: | chromosome 6 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.034040_1 | CLIP2.034040 | intron | 80 | 6.1 |
| CLIP2.034040_2 | CLIP2.034040 | intron | 80 | 6.1 |
| CLIP2.075120_1 | CLIP2.075120 | intron | 63 | 6.1 |
| CLIP2.076887_1 | CLIP2.076887 | 3'UTR | 80 | 6.1 |
| CLIP2.076887_2 | CLIP2.076887 | 3'UTR | 80 | 6.1 |
| CLIP2.077220_1 | CLIP2.077220 | intron | 63 | 6.1 |
| LMJ.RY0402.040188_1 | LMJ.RY0402.040188 | CDS | 95 | 5.5 |
| LMJ.RY0402.040188_2 | LMJ.RY0402.040188 | CDS | 95 | 5.5 |
| LMJ.RY0402.053098_1 | LMJ.RY0402.053098 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.091245_1 | LMJ.RY0402.091245 | CDS | 73 | 5.5 |
| LMJ.RY0402.158595_1 | LMJ.RY0402.158595 | intron | 95 | 5.5 |
| LMJ.RY0402.158595_2 | LMJ.RY0402.158595 | intron | 95 | 5.5 |
| LMJ.RY0402.180496_1 | LMJ.RY0402.180496 | intron | 58 | 5.5 |
| LMJ.RY0402.210228_1 | LMJ.RY0402.210228 | CDS | 73 | 5.5 |
| LMJ.RY0402.230371_1 | LMJ.RY0402.230371 | intron | 95 | 5.5 |
| LMJ.RY0402.230371_2 | LMJ.RY0402.230371 | intron | 95 | 5.5 |
| LMJ.RY0402.243544_1 | LMJ.RY0402.243544 | CDS | 73 | 5.5 |
| LMJ.RY0402.252721_2 | LMJ.RY0402.252721 | intron | 95 | 5.5 |
| LMJ.RY0402.252721_3 | LMJ.RY0402.252721 | intron | 95 | 5.5 |
| PFAM: | |
| PANTHER: | PTHR22942 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT5G64520 |
| Best arabidopsis TAIR symbol: | ATXRCC2,XRCC2 |
| Best arabidopsis TAIR defline: | homolog of X-ray repair cross complementing 2 (XRCC2) |
| Phytozome Locus Page |
Mutants in this gene exhibit a phenotype under the following conditions:
| Cisplatin, screen 1 of 4 ( 96% confidence (FDR = 0.034)) |
| Cisplatin, screen 2 of 4 ( 99% confidence (FDR = 9.9e-06)) |
| Cisplatin, screen 3 of 4 ( 99% confidence (FDR = 1.5e-07)) |
| Cisplatin, screen 4 of 4 ( 99% confidence (FDR = 0.00045)) |
| Methyl methanesulfonate, screen 3 of 4 ( 94% confidence (FDR = 0.052)) |
| Methyl methanesulfonate, screen 4 of 4 ( 98% confidence (FDR = 0.011)) |
Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.
If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.