Insertion junction: CLIP2.076887_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076887
Chromosome:chromosome 6
Location:3806109
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278174 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase 3'UTR
Cre06.g278175 (1 of 1) K14793 - ribosomal RNA-processing protein 9 (RRP9) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCTTCCCCCACGCAACCTGCTACACACTGCACAACGGAGCCACGACGT
Internal bar code:GCAGAGGCGTAGGTAGCTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1243
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GGCACCAATAGCAAGCAACC
Suggested primer 2:TGCAAGTATGGAGTGCTGGG