Insertion junction: CLIP2.034371_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.034371
Chromosome:chromosome 10
Location:4582479
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g451600 SRR28,SRR28B (1 of 1) PF00059//PF00704//PF14295 - Lectin C-type domain (Lectin_C) // Glycosyl hydrolases family 18 (Glyco_hydro_18) // PAN domain (PAN_4); Lectin-domain glycosyl hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCATGAGGGGCCTGTTGCGTCGATGTTCCCGCTCCATCCAGTTGCACCA
Internal bar code:CTGTCATTGGACTGTGATTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:5154
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGGGCCTTTCAACAAGTT
Suggested primer 2:TTGGCGACTAACCCTGAACC