Insertion junction: CLIP2.034440_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.034440
Chromosome:chromosome 10
Location:2958779
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g440200 SMC5B (1 of 2) PTHR19306:SF1 - STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5; Structural Maintenance of Chromosomes protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGAAGGCCAAGTCGGCGCGGGTGGCCCGGGAGAAGCTGCAAGGCGAGA
Internal bar code:ACATAGTTATTCTAGGAGAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1566
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCAGCTTGTGGATGTCCT
Suggested primer 2:TGGACAAGTACGAGCTGCTG