Insertion junction: CLIP2.034441_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034441
Chromosome:chromosome 2
Location:8062290
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g144550 (1 of 4) PTHR10110:SF119 - SODIUM/HYDROGEN EXCHANGER 5-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCCGCCACCGACCATCCTCCTTCTCCTTTCCATAGCCCGGCACCCCAA
Internal bar code:AGCTAGCACAACGATTCGGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2738
LEAP-Seq percent confirming:88.4615
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTGGGGCTCATCATGAA
Suggested primer 2:ACCATCTGCTCAGGTGCTTC