Insertion junction: CLIP2.034850_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.034850
Chromosome:chromosome 7
Location:2268359
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g327700 (1 of 2) PTHR24161//PTHR24161:SF17 - FAMILY NOT NAMED // PALMITOYLTRANSFERASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTGTGGGCTTGGGCGCCCGCGTGCGGCGTGGGGGCGTTCTTGTCGTC
Internal bar code:TAAGACTTCCAGGCGGACACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:748
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGTACACAGGCAGCTTCA
Suggested primer 2:AGGTGAATGCACGGGTTAGG