Insertion junction: CLIP2.034852_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.034852
Chromosome:chromosome 4
Location:2209961
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g220200 (1 of 1) PTHR16254:SF13 - K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAACGTAAGAAAGTGTGGTTTCGGGGTCTCTTGGGGCGCGGGCGCGGG
Internal bar code:GGTGTTAAGTGAATCAAGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2531
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCCATTAAGCACGCGTG
Suggested primer 2:GGGGGAGAGGTAGGAAAGGT