Insertion junction: CLIP2.034934_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034934
Chromosome:chromosome 7
Location:5258732
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g349500 (1 of 2) PTHR15574:SF40 - WD AND TETRATRICOPEPTIDE REPEATS PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCATCTCCGACTTCAACCGCCGCTGTTGCAGTGCGCCGGGCGGCGCCG
Internal bar code:TGAATCCCATAGTAAAATAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:5321
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:CGATGATGAGGATGCAGGCT
Suggested primer 2:TGCATCTACAACAGGCGACC