Insertion junction: CLIP2.034953_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034953
Chromosome:chromosome 5
Location:1360868
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234600 (1 of 100) IPR001810 - F-box domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCCAAACAAATTCACGCAAACACATGCTCACGCCGACGACCTCATACA
Internal bar code:GAGTACATAAGGTTCGGTGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1407
LEAP-Seq percent confirming:89.2857
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCAGGGGTGGTACTTTAC
Suggested primer 2:CGCGCCTTACGTAATTTGCA