Insertion junction: CLIP2.035147_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.035147
Chromosome:chromosome 2
Location:3952774
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102350 ATG3,APG3 Autophagy-related protein; (1 of 1) K08343 - ubiquitin-like-conjugating enzyme ATG3 (ATG3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGGTAAAGCTCTGTATTAGGCAGATACCGTATCCCGTGGGCACGCACC
Internal bar code:GGTCCTTACGCTAAACTTATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2063
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGTACGATGCTGGCTCAT
Suggested primer 2:CTCCATCCCGCACCATCTAC