Insertion junction: CLIP2.035374_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035374
Chromosome:chromosome 17
Location:5762134
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g741050 LCV1,COV1 COV1-like protein; (1 of 1) PF04367 - Protein of unknown function (DUF502) (DUF502) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGGAATGGCCATGCCGCAAGACACGACGATTTCTGCGGGCGTTGACA
Internal bar code:AAATCAGGTCACTGTGGGGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:3684
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTGGAGAGATGGGTTGGG
Suggested primer 2:CACCGTACGAACAGGGGAAA