Gene: Cre17.g741050
Overview
| Common name: | LCV1,COV1 |
| Defline: | COV1-like protein; (1 of 1) PF04367 - Protein of unknown function (DUF502) (DUF502) |
| Description: | Integral membrane protein of unknown function, with homologs in plants and bacteria; in Arabidopsis, COV1 (CONTINUOUS VASCULAR RING) also called LCV1 is involved in auxin mediated signaling to control stem vascular tissue pattern formation - pfam4367, DUF52 |
| Synonyms: | g17924.t1,COV1,LCV1 |
| Chromosome: | chromosome 17 |
Protein Localization
A plasmid for expressing Cre17.g741050 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre17.g741050-Venus-3xFLAG
Imaged strain: CSI_LW11E10
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
shapes in cytoplasm/uncategorized shapes in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.035374_1 | CLIP2.035374 | CDS | 80 | 6.1 |
| CLIP2.051485_1 | CLIP2.051485 | CDS | 80 | 6.1 |
| CLIP2.051485_2 | CLIP2.051485 | CDS | 80 | 6.1 |
| CLIP2.075350_1 | CLIP2.075350 | 5'UTR | 63 | 6.1 |
| LMJ.RY0402.187346_2 | LMJ.RY0402.187346 | CDS | 95 | 5.5 |
| LMJ.RY0402.187346_3 | LMJ.RY0402.187346 | CDS | 95 | 5.5 |
| LMJ.RY0402.221635_1 | LMJ.RY0402.221635 | 5'UTR | 73 | 5.5 |
| LMJ.RY0402.232049_2 | LMJ.RY0402.232049 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.232049_3 | LMJ.RY0402.232049 | 3'UTR | 95 | 5.5 |
Gene Annotations
| PFAM: | PF04367 |
| PANTHER: | PTHR31876 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT2G20130 |
| Best arabidopsis TAIR symbol: | COV1 |
| Best arabidopsis TAIR defline: | like COV 1 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.