Insertion junction: CLIP2.051485_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.051485
Chromosome:chromosome 17
Location:5763976
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g741050 LCV1,COV1 COV1-like protein; (1 of 1) PF04367 - Protein of unknown function (DUF502) (DUF502) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATACACTGTCACAGCCACCGGGAACAGGATGGCACTACAGGCAGAGAG
Internal bar code:AGTGCTGTCCATTTGTTCCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2073
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGGCGGAGAGGAAAATT
Suggested primer 2:GCCCTCACCGTCATCTTTGA