Insertion junction: CLIP2.035560_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.035560
Chromosome:chromosome 3
Location:1962870
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155450 (1 of 3) PF01167 - Tub family (Tub) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGACCGATGCCATCTTGACGCGGCCGCGGAAGTTCAGGCACCTGCACA
Internal bar code:CGCTACACGATGATACGGTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1034
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TGGATCCAATGGGGTCGTTG
Suggested primer 2:TCGCAGACCTATCATCGTGC