Insertion junction: CLIP2.035623_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.035623
Chromosome:chromosome 13
Location:1887771
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575650 (1 of 2) PTHR24056//PTHR24056:SF107 - CELL DIVISION PROTEIN KINASE // CYCLIN-DEPENDENT KINASE 11A-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGAGACAGGCCGCCGTTGCGCACCTCCCCGAAGGCGCCGGCCCCACCC
Internal bar code:TTCTATGTCAATTTAACATGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:883
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCATTCCTATTCTCCGGC
Suggested primer 2:GAGTCTGAGAGAACGGGCAC