Insertion junction: CLIP2.035877_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.035877
Chromosome:chromosome 9
Location:2122363
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396000 NAR5,NRT2C Nitrate/nitrite transporter; (1 of 4) K02575 - MFS transporter, NNP family, nitrate/nitrite transporter (NRT, narK, nrtP, nasA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCATCGCTCCACTCGTACATTAACTCCCTTCAGCGCACCAGCAGCCCA
Internal bar code:TTGTATAAGTTGGAGGCTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:598
LEAP-Seq percent confirming:74.2857
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTGGACATCGTGGGTGAG
Suggested primer 2:AGATCAGGGGCGCAAATGAA