Insertion junction: CLIP2.036026_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.036026
Chromosome:chromosome 16
Location:7016034
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673617 PRF1,PRFA1 Putative chloroplast peptide chain release factor 1; (1 of 2) PTHR11075:SF9 - PEPTIDE CHAIN RELEASE FACTOR 1, MITOCHONDRIAL-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTCTTTGGGAACCAACTCACACCAAAACTGGAGCCGCAGCAATACCGC
Internal bar code:TCGAGAAACCCGCTTTGTCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4258
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTTGTTGCGTTGCTGAA
Suggested primer 2:GGCGCGACCATTGTTATGAC