Insertion junction: CLIP2.036263_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036263
Chromosome:chromosome 4
Location:3131144
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225900 VAM2,VAMP72,VAMP2 Endosomal R-SNARE protein, Vamp7/Nyv1-family (R.III); (1 of 1) PTHR21136//PTHR21136:SF73 - SNARE PROTEINS // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTACCCAAACCGTCCCTCACACCTTCGTCCCTCCCTCCCTTCCCCTTC
Internal bar code:TCTTCTTTGGTGTTGGGTATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3249
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGGAGAAGTACGCGGAGA
Suggested primer 2:GCCCTACTTGGTGCAGTTCT