Gene: Cre04.g225900

Overview

Common name:VAM2,VAMP72,VAMP2
Defline:Endosomal R-SNARE protein, Vamp7/Nyv1-family (R.III); (1 of 1) PTHR21136//PTHR21136:SF73 - SNARE PROTEINS // SUBFAMILY NOT NAMED
Description:Expressed Protein, similar to VAMP7 R-SNAREs, involved in Golgi/PM and Golgi/endosomal trafficking; most similar to VAMP72-family of land plants; part of a 4-member gene family in Chlamydomonas all on same scaffold and in 2 tandem pairs, location and order of gene family members are syntenic in Volvox
Synonyms:VAMP72,Cre04.g225900.t1.1,VAM2,g4938.t1
Chromosome:chromosome 4

Protein Localization

A plasmid for expressing Cre04.g225900 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre04.g225900-Venus-3xFLAG

Imaged strain: CSI_LW02E5

Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.

Classification(s):

secretory pathway/endosome

If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.

VenusChlorophyllBright fieldMerged

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.021577_1 CLIP2.021577 intron 80 6.1
CLIP2.021577_2 CLIP2.021577 intron 80 6.1
CLIP2.032246_1 CLIP2.032246 intron 80 6.1
CLIP2.032246_2 CLIP2.032246 intron 80 6.1
CLIP2.036263_1 CLIP2.036263 intron 80 6.1
CLIP2.036263_2 CLIP2.036263 intron 80 6.1
CLIP2.037218_1 CLIP2.037218 intron 80 6.1
CLIP2.037218_2 CLIP2.037218 intron 80 6.1
CLIP2.048232_1 CLIP2.048232 intron 80 6.1
CLIP2.054186_1 CLIP2.054186 intron 80 6.1
LMJ.RY0402.123882_1 LMJ.RY0402.123882 5'UTR 73 5.5
LMJ.RY0402.123999_1 LMJ.RY0402.123999 3'UTR 58 5.5
LMJ.RY0402.123999_2 LMJ.RY0402.123999 3'UTR 58 5.5

Gene Annotations

PFAM:PF00957, PF13774
PANTHER: PTHR21136 PTHR21136:SF73
KEGG_ec:
KEGG_orthology:K08511
KOG:KOG0859
Gene ontology terms::GO:0006810, GO:0016021, GO:0016192
Best arabidopsis TAIR name:AT2G32670
Best arabidopsis TAIR symbol:ATVAMP727,VAMP727
Best arabidopsis TAIR defline:vesicle-associated membrane protein 725
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.