Insertion junction: LMJ.RY0402.123999_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.123999
Chromosome:chromosome 4
Location:3132885
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre04.g225900 VAM2,VAMP72,VAMP2 Endosomal R-SNARE protein, Vamp7/Nyv1-family (R.III); (1 of 1) PTHR21136//PTHR21136:SF73 - SNARE PROTEINS // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGGTCGATGGTTCTTTGTTCTTTGCGT
Internal bar code:GCGAATGGATGCCTCTACTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:132
LEAP-Seq percent confirming:99.5261
LEAP-Seq n confirming:210
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAGCAGTTCCAAAAGAAG
Suggested primer 2:ACCCGGCCTAGATAGCCTAA