Insertion junction: CLIP2.037218_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.037218
Chromosome:chromosome 4
Location:3130459
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225900 VAM2,VAMP72,VAMP2 Endosomal R-SNARE protein, Vamp7/Nyv1-family (R.III); (1 of 1) PTHR21136//PTHR21136:SF73 - SNARE PROTEINS // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGGTGTCGATCCGGCACGCGCACATGACACCTGCCCCTGCGCCCATGC
Internal bar code:GCGGGAAATTGAACCATACTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2375
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTCGACTATGCCGCTAA
Suggested primer 2:CACGTCCTTCACCTCGTTCA