Insertion junction: CLIP2.036686_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036686
Chromosome:chromosome 13
Location:3308291
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g586050 (1 of 1) PTHR13833:SF49 - NHL REPEAT-CONTAINING PROTEIN 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCTCCAGGTCCTGAGGATGGGGGTGGGCCACATTCACGATTCGGCGGT
Internal bar code:CATCCATTGCCAAACAGGGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:356
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGCCAGGGAGGGGTTAGA
Suggested primer 2:CCCACTGCCTCGATGAAGTT