Gene: Cre13.g586050

Overview

Common name:
Defline:	(1 of 1) PTHR13833:SF49 - NHL REPEAT-CONTAINING PROTEIN 2
Description:
Synonyms:	g14382.t1
Chromosome:	chromosome 13

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.013407_1	CLIP2.013407	intron	80	6.1
CLIP2.013407_2	CLIP2.013407	intron	80	6.1
CLIP2.016344_1	CLIP2.016344	intron	80	6.1
CLIP2.016344_2	CLIP2.016344	intron	80	6.1
CLIP2.018797_1	CLIP2.018797	intron	80	6.1
CLIP2.018797_2	CLIP2.018797	intron	80	6.1
CLIP2.036686_2	CLIP2.036686	CDS	80	6.1
CLIP2.036686_3	CLIP2.036686	CDS	80	6.1
CLIP2.042308_1	CLIP2.042308	intron	80	6.1
CLIP2.042308_2	CLIP2.042308	intron	80	6.1
CLIP2.057308_2	CLIP2.057308	intron	63	6.1
CLIP2.069867_1	CLIP2.069867	3'UTR	80	6.1
CLIP2.069867_2	CLIP2.069867	3'UTR	80	6.1
LMJ.RY0402.044962_1	LMJ.RY0402.044962	intron	95	5.5
LMJ.RY0402.044962_2	LMJ.RY0402.044962	intron	95	5.5
LMJ.RY0402.050177_1	LMJ.RY0402.050177	3'UTR	73	5.5
LMJ.RY0402.055589_1	LMJ.RY0402.055589	CDS	73	5.5
LMJ.RY0402.065270_1	LMJ.RY0402.065270	intron	73	5.5
LMJ.RY0402.099838_1	LMJ.RY0402.099838	intron	95	5.5
LMJ.RY0402.099838_2	LMJ.RY0402.099838	intron	95	5.5
LMJ.RY0402.100639_1	LMJ.RY0402.100639	intron	95	5.5
LMJ.RY0402.100639_2	LMJ.RY0402.100639	intron	95	5.5
LMJ.RY0402.106349_1	LMJ.RY0402.106349	intron	58	5.5
LMJ.RY0402.116086_1	LMJ.RY0402.116086	intron	73	5.5
LMJ.RY0402.130705_1	LMJ.RY0402.130705	intron	73	5.5
LMJ.RY0402.140130_1	LMJ.RY0402.140130	CDS	95	5.5
LMJ.RY0402.140130_2	LMJ.RY0402.140130	CDS	95	5.5
LMJ.RY0402.153986_1	LMJ.RY0402.153986	3'UTR	95	5.5
LMJ.RY0402.153986_2	LMJ.RY0402.153986	3'UTR	95	5.5
LMJ.RY0402.159396_1	LMJ.RY0402.159396	intron	95	5.5
LMJ.RY0402.159396_2	LMJ.RY0402.159396	intron	95	5.5
LMJ.RY0402.177046_1	LMJ.RY0402.177046	intron	73	5.5
LMJ.RY0402.184273_1	LMJ.RY0402.184273	intron	95	5.5
LMJ.RY0402.184273_2	LMJ.RY0402.184273	intron	95	5.5
LMJ.RY0402.184273_3	LMJ.RY0402.184273	intron	95	5.5
LMJ.RY0402.195279_1	LMJ.RY0402.195279	CDS	95	5.5
LMJ.RY0402.195279_2	LMJ.RY0402.195279	CDS	95	5.5
LMJ.RY0402.214062_1	LMJ.RY0402.214062	intron	95	5.5
LMJ.RY0402.214062_2	LMJ.RY0402.214062	intron	95	5.5

Gene Annotations

PFAM:	PF01436, PF13905
PANTHER:	PTHR13833 PTHR13833:SF49
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::	GO:0005515
Best arabidopsis TAIR name:	AT1G56500
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:	haloacid dehalogenase-like hydrolase family protein
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Cisplatin, screen 3 of 4 ( 91% confidence (FDR = 0.084))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.