Insertion junction: CLIP2.069867_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.069867
Chromosome:chromosome 13
Location:3314672
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g586050 (1 of 1) PTHR13833:SF49 - NHL REPEAT-CONTAINING PROTEIN 2 3'UTR
Cre13.g586100 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTCACGCACCCCGACCGCCCAATGCAGCCACATAATTTTTAATTTTCT
Internal bar code:AAGTACGTAGCCTGCTTGGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:565
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGCTAAGTCGCTGTTGTA
Suggested primer 2:AAGCTGGAGGATTGGGAAGC