Insertion junction: LMJ.RY0402.100639_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.100639
Chromosome:chromosome 13
Location:3273534
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g586050 (1 of 1) PTHR13833:SF49 - NHL REPEAT-CONTAINING PROTEIN 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGCCGGCCGCCGCTCCTCACCATCCTG
Internal bar code:GACGGACTCACAACGGGATTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:652
LEAP-Seq percent confirming:99.1887
LEAP-Seq n confirming:6969
LEAP-Seq n nonconfirming:57
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGGCATCATAAGTTGCTA
Suggested primer 2:TGAACAGGTTGTCGCTGAAG