Insertion junction: LMJ.RY0402.177046_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.177046
Chromosome:chromosome 13
Location:3276118
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g586050 (1 of 1) PTHR13833:SF49 - NHL REPEAT-CONTAINING PROTEIN 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCTCATTCCCACAGCCGCCGGGGCGCAC
Internal bar code:GGCCTTTTTCGCGGGATGGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:313
LEAP-Seq percent confirming:94.451
LEAP-Seq n confirming:800
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGTAGCACGAAGGACGTCTG
Suggested primer 2:CACCAACGAGATCACCACAC