Insertion junction: LMJ.RY0402.106349_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.106349
Chromosome:chromosome 13
Location:3271927
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre13.g586050 (1 of 1) PTHR13833:SF49 - NHL REPEAT-CONTAINING PROTEIN 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCCATCCGCACCTGTCCTTCTCGTTGT
Internal bar code:GTTTTTCCGACTGAACCGGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:178
LEAP-Seq percent confirming:97.9363
LEAP-Seq n confirming:2183
LEAP-Seq n nonconfirming:46
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTTGACTGCTGTGTTTGT
Suggested primer 2:TGGTTTTGGTTTAGCTTGGG