Insertion junction: CLIP2.037652_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037652
Chromosome:chromosome 12
Location:8465232
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549800 CSK5 (1 of 3) K03097 - casein kinase II subunit alpha (CSNK2A); Casein kinase II-related Ser/Thr kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGACAGATGGCTGGGTGTGGGATGGCCGGTTGACCTTGAGCTGGCGAG
Internal bar code:GGTGCTGAGTCGAGTTTCTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:227
LEAP-Seq percent confirming:17.3913
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAAGGTCGCAAACTGGAT
Suggested primer 2:GTTACAAGGGGTGGGGGATG