Insertion junction: CLIP2.037691_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.037691
Chromosome:chromosome 12
Location:8322181
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g550900 SSD3 Sterol sensing domain protein; (1 of 1) K12385 - Niemann-Pick C1 protein (NPC1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAACCAGGGCTGCCGCATGCTCGGAAGTCCATGTCAGCCGCCGCCCCT
Internal bar code:TGTGGGCTATGATTCGATCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:824
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGTCTGTCAGAGTATCCG
Suggested primer 2:TGTGCACATGGGGCATATGT