Insertion junction: CLIP2.037825_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.037825
Chromosome:chromosome 7
Location:3468956
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g335750 IFT88 (1 of 1) K16474 - intraflagellar transport protein 88 (IFT88); Intraflagellar Transport Protein 88 3'UTR
Cre07.g800815 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAAAGGTGCTGAGCTTTGGCTCGGCTGGGACGTCCAGCGCACTGCCTG
Internal bar code:ACCGCTCGCTGGCGACGGTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4278
LEAP-Seq percent confirming:96.7391
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCCCCATCTGTACTCCT
Suggested primer 2:CACGTGTTTCGATCTCCCCA