Insertion junction: CLIP2.037980_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.037980
Chromosome:chromosome 1
Location:1801878
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g010050 (1 of 18) 3.5.1.98 - Histone deacetylase / HDAC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCATCAACGTACCCAACGCCGCAGCCCTGCTGTACCAGCTCAACCAAC
Internal bar code:GTCTTTGGGCTGATTCTGCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:289
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCACTCCGCAAACTACACCT
Suggested primer 2:GCTCATTGGAAGCGCTGATG