Insertion junction: CLIP2.038469_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038469
Chromosome:chromosome 12
Location:6704324
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTATTCGTTTGTCATCAACAATGCATCCAACGCCGTTCCAGAAGGGCC
Internal bar code:GGCATCTTAGCAGATGGTCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2408
LEAP-Seq percent confirming:56.6038
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGAAACCCCTACAAGCG
Suggested primer 2:AAACACACTTCCCCACAGCA