Insertion junction: CLIP2.038484_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.038484
Chromosome:chromosome 1
Location:2271016
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g012700 KCN6 (1 of 4) IPR000595//IPR002110//IPR005821//IPR018490//IPR020683 - Cyclic nucleotide-binding domain // Ankyrin repeat // Ion transport domain // Cyclic nucleotide-binding-like // Ankyrin repeat-containing domain; Voltage-gated potassium channel intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCATGGTGACCGCACATGCATGCCGCACGCACCAGGTGCAGCAGCTT
Internal bar code:TTTATGTTTGAAAATTATGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5147
LEAP-Seq percent confirming:97.479
LEAP-Seq n confirming:116
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:119

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGTTCCTGGTCGCCTTCA
Suggested primer 2:CCACAGCAGCTGCAAAACAT