Gene: Cre01.g012700

Overview

Common name:KCN6
Defline:(1 of 4) IPR000595//IPR002110//IPR005821//IPR018490//IPR020683 - Cyclic nucleotide-binding domain // Ankyrin repeat // Ion transport domain // Cyclic nucleotide-binding-like // Ankyrin repeat-containing domain; Voltage-gated potassium channel
Description:part of a cluster of 4 related potassium channels
Synonyms:g314.t1,KCN6,Cre01.g012700.t1.1
Chromosome:chromosome 1

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.015943_1 CLIP2.015943 CDS 80 6.1
CLIP2.015943_2 CLIP2.015943 CDS 80 6.1
CLIP2.022020_1 CLIP2.022020 intron 80 6.1
CLIP2.022020_2 CLIP2.022020 intron 80 6.1
CLIP2.029180_1 CLIP2.029180 intron 80 6.1
CLIP2.029180_2 CLIP2.029180 intron 80 6.1
CLIP2.037580_1 CLIP2.037580 CDS 80 6.1
CLIP2.037580_2 CLIP2.037580 CDS 80 6.1
CLIP2.038484_1 CLIP2.038484 intron 80 6.1
CLIP2.038484_2 CLIP2.038484 intron 80 6.1
LMJ.RY0402.053262_1 LMJ.RY0402.053262 CDS 58 5.5
LMJ.RY0402.073442_1 LMJ.RY0402.073442 CDS 73 5.5
LMJ.RY0402.082441_1 LMJ.RY0402.082441 intron 73 5.5
LMJ.RY0402.093024_1 LMJ.RY0402.093024 CDS 95 5.5
LMJ.RY0402.093024_2 LMJ.RY0402.093024 CDS 95 5.5
LMJ.RY0402.108665_1 LMJ.RY0402.108665 intron 58 5.5
LMJ.RY0402.117030_1 LMJ.RY0402.117030 CDS 58 5.5
LMJ.RY0402.126070_1 LMJ.RY0402.126070 intron 73 5.5
LMJ.RY0402.131520_1 LMJ.RY0402.131520 intron 73 5.5
LMJ.RY0402.158828_1 LMJ.RY0402.158828 CDS 73 5.5
LMJ.SG0182.010899_1 LMJ.SG0182.010899 intron 75 5.3

Gene Annotations

PFAM:PF00520, PF12796
PANTHER: PTHR10217
KEGG_ec:
KEGG_orthology:
KOG:KOG4412
Gene ontology terms::GO:0005216, GO:0005515, GO:0006811, GO:0016020, GO:0055085
Best arabidopsis TAIR name:AT5G37500.1
Best arabidopsis TAIR symbol:GORK
Best arabidopsis TAIR defline:gated outwardly-rectifying K+ channel
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Paromomycin, screen 3 of 6 ( 71% confidence (FDR = 0.29))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.