Insertion junction: CLIP2.038568_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038568
Chromosome:chromosome 12
Location:1527640
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g487700 (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase; Amidated peptide precursor CDS
lncRNA_TCONS_00079298 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGACCAGCATTGCGGTCTTTGCCAAGCCGCTGGTGCCGGCCGCTGCCG
Internal bar code:TCGTGTCATTGCGACAGTGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2782
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGCTGTTGTTGAGGGATG
Suggested primer 2:TTGCTTTGTCATGCCGTGTG