Insertion junction: CLIP2.038581_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038581
Chromosome:chromosome 13
Location:4265350
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g592150 PRP28,SPL28 (1 of 1) K12858 - ATP-dependent RNA helicase DDX23/PRP28 (DDX23, PRP28); DEAD/DEAH box helicase, possible nuclear pre-mRNA splicing factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTACCATATTGACGCCCGTTGCTGTACCTAGGCCGGCCATTACTTACGT
Internal bar code:TTGAACCTATATTATTTCTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2956
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGCAGTGACAGGGACAAG
Suggested primer 2:GCAAGCTCTGGAGTCCCAAT