| Common name: | SPL28,PRP28 |
| Defline: | DEAD/DEAH box helicase, possible nuclear pre-mRNA splicing facto |
| Description: | DEAD/DEAH box helicase, possible nuclear pre-mRNA splicing factor. Similar to yeast pre-mRNA-splicing ATP-dependent RNA helicase PRP28 (Helicase CA8)gi|1172596|sp|P23394|. Previously annotated as PRP28 |
| Synonyms: | g14517.t1,Cre13.g592150.t1.1,PRP28,SPL28 |
| Chromosome: | chromosome_13 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Orientation | Insertion Junction Feature | Confidence (%) |
|---|---|---|---|---|
| LMJ.RY0402.052109_1 | LMJ.RY0402.052109 | antisense | 3'UTR | 73 |
| LMJ.RY0402.071552_2 | LMJ.RY0402.071552 | antisense | CDS | 73 |
| LMJ.RY0402.105705_1 | LMJ.RY0402.105705 | antisense | 5'UTR | 73 |
| LMJ.RY0402.107021_3 | LMJ.RY0402.107021 | sense | 5'UTR | 73 |
| LMJ.RY0402.163873_1 | LMJ.RY0402.163873 | antisense | intron | 95 |
| LMJ.RY0402.163873_2 | LMJ.RY0402.163873 | antisense | intron | 95 |
| LMJ.RY0402.184880_2 | LMJ.RY0402.184880 | antisense | CDS | 73 |
| LMJ.RY0402.193945_1 | LMJ.RY0402.193945 | antisense | intron | 73 |
| LMJ.RY0402.203593_1 | LMJ.RY0402.203593 | sense | intron | 95 |
| LMJ.RY0402.203593_2 | LMJ.RY0402.203593 | antisense | intron | 95 |
| LMJ.RY0402.208086_2 | LMJ.RY0402.208086 | antisense | intron | 73 |
| LMJ.RY0402.209161_1 | LMJ.RY0402.209161 | antisense | intron | 58 |
| PFAM: | PF00271, PF00270 |
| PANTHER: | PTHR24031 PTHR24031:SF47 |
| KEGG_ec: | 3.6.4.13 |
| KEGG_orthology: | K12858 |
| KOG: | KOG0333 |
| Gene ontology terms:: | GO:0003676, GO:0004386, GO:0005524, GO:0008026 |
| Best arabidopsis TAIR name: | AT2G33730.1 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | P-loop containing nucleoside triphosphate hydrolases superfamily |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.