Insertion junction: CLIP2.041649_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041649
Chromosome:chromosome 13
Location:4265077
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g592150 PRP28,SPL28 (1 of 1) K12858 - ATP-dependent RNA helicase DDX23/PRP28 (DDX23, PRP28); DEAD/DEAH box helicase, possible nuclear pre-mRNA splicing factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTATCATCCCACTTGCGAAGCGCCCCAGCCTTGGGCCCTCCCGTGCCG
Internal bar code:CTATAGCCAAGGATACATGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3440
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGACAGGTACGCCCGTTA
Suggested primer 2:GGAATCCCTTGGACATGGCA