Insertion junction: CLIP2.041649_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041649
Chromosome:chromosome 13
Location:4265077
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g592150 PRP28,SPL28 (1 of 1) K12858 - ATP-dependent RNA helicase DDX23/PRP28 (DDX23, PRP28); DEAD/DEAH box helicase, possible nuclear pre-mRNA splicing factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCGTCCACAAACGCACTAAATGAGTCTCCTCTCACCTTGTCCCTTTTG
Internal bar code:ACGAGATGTAAGTGTGTTTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1218
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GGAATCCCTTGGACATGGCA
Suggested primer 2:TAGGACAGGTACGCCCGTTA