Insertion junction: CLIP2.038942_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.038942
Chromosome:chromosome 16
Location:1494009
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g652950 (1 of 1) K11274 - chromosome transmission fidelity protein 4 (WDHD1, CTF4) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCCCCATCCGTCACTGTCTCCCGCCCGCGCAGCACGGTGGTTGCGCC
Internal bar code:GGGCTAGTCTGACAGGGTGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:272
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCGAAGCCGTAGTAGTCG
Suggested primer 2:ATGTGGGGTGCAGAGGATTG