Insertion junction: CLIP2.038953_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.038953
Chromosome:chromosome 16
Location:6728742
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673001 FAD4,LCI2 (1 of 1) PTHR24067:SF41 - AKT-INTERACTING PROTEIN; Fatty acide desaturase 4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATGCTCCTTGGCTCCAATCATGTTTGCGACGTGTGTTGTGTTCTTCT
Internal bar code:AAGGATATAGTCTGCAAAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1943
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGCGTGTTTGTGTGCATC
Suggested primer 2:CAAACTTGCTGCTGTGGGTC