Insertion junction: CLIP2.038958_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038958
Chromosome:chromosome 9
Location:1112278
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401700 (1 of 1) PTHR16193:SF0 - TETRATRICOPEPTIDE REPEAT PROTEIN 27 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGATATGGATGAGGAGCTGCGGCAGGCAGGTGTTAGAGAGTCGGTGTG
Internal bar code:GGGTCTTTTGGAGTACGCCATC

Confirmation - LEAP-Seq

LEAP-Seq distance:789
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CTATTCCATCCGACAGGCCC
Suggested primer 2:CAGTTACACGCACATCCCCT