Insertion junction: CLIP2.039023_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039023
Chromosome:chromosome 3
Location:6754372
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g196450 (1 of 1) K15178 - RNA polymerase-associated protein RTF1 (RTF1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCCGAGTGCACGCGCTCCCGCTCTCGCTCCCGCATGCGCTCCCGCTCT
Internal bar code:GAGTACTCCGCAGTACAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1228
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGGACTGGTGCGTTATG
Suggested primer 2:GAAGCAGGGGAGGAAAGGAC