Insertion junction: CLIP2.039056_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.039056
Chromosome:chromosome 5
Location:2132950
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g236950 SRH11 (1 of 1) K14440 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:3.6.4.12] (SMARCAL1, HARP); SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCCCCTTCTGCCTCCCGCGACTCCCTCCCCCATTTAGCCTCCCTCCCT
Internal bar code:TGGCTTGACTGAAGCGCAGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:709
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGTTTGTGACACGCAGT
Suggested primer 2:TCTCTCTCACACACACGCAC